PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Jcr4S02314.30
Common NameJCGZ_07518, LOC105638001
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha
Family ERF
Protein Properties Length: 198aa    MW: 21991.5 Da    PI: 4.6694
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Jcr4S02314.30genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.21e-181565155
            AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                   s+ykGVr +k +g+Wv+eIr p++   r r++lg++++ae+Aa+a +aa  +l+g
  Jcr4S02314.30 15 SKYKGVRKRK-WGKWVSEIRLPNS---RERIWLGSYDSAEKAARAFDAALFCLRG 65
                   89*****999.**********933...5*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541713.92E-211575IPR016177DNA-binding domain
PfamPF008472.1E-111565IPR001471AP2/ERF domain
CDDcd000186.84E-311575No hitNo description
SMARTSM003804.3E-331679IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.3E-291674IPR001471AP2/ERF domain
PROSITE profilePS5103222.3261673IPR001471AP2/ERF domain
PRINTSPR003671.6E-91728IPR001471AP2/ERF domain
PRINTSPR003671.6E-93955IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    Send to blast
MVKHTTDKPA DRSDSKYKGV RKRKWGKWVS EIRLPNSRER IWLGSYDSAE KAARAFDAAL  60
FCLRGRTAKF NFPDNPPEIA GGRSLSPPEI QAAAARFANS YPSRKQLENS STDQSVTELQ  120
AESPCPSVVS DLTAQIDGSE LMMDIPFLDL LANTDYGIFP GFDDLHNDFF SPLTGPGPDL  180
VEENLDGVVA QDSFLWNF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11723KGVRKRK
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00151DAPTransfer from AT1G19210Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012077091.11e-146PREDICTED: ethylene-responsive transcription factor ERF017
SwissprotQ84QC26e-57ERF17_ARATH; Ethylene-responsive transcription factor ERF017
TrEMBLA0A067KCS81e-146A0A067KCS8_JATCU; Uncharacterized protein
STRINGPOPTR_0006s14100.11e-99(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14793399
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.13e-58ERF family protein
Publications ? help Back to Top
  1. Zhang L, et al.
    Global analysis of gene expression profiles in physic nut (Jatropha curcas L.) seedlings exposed to salt stress.
    PLoS ONE, 2014. 9(5): p. e97878
    [PMID:24837971]